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Merged
joverlee521 merged 1 commit into from
Oct 19, 2026
Merged

Add treeknit #298

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3 changes: 3 additions & 0 deletions Dockerfile
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Expand Up @@ -323,6 +323,9 @@ RUN /builder-scripts/download-repo https://github.com/nextstrain/fauna master .
# Add Treetime
RUN pip3 install phylo-treetime

# Add treeknit
RUN pip3 install treeknit

# Augur
# Augur is an editable install so we can overlay the augur version in the image
# with --volume=.../augur:/nextstrain/augur and still have it globally
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