Issues

• CI: possible stochastic error in Cram test

  nextstrain/docker-base#285 · Filter by author joverlee521 opened on May 13, 2026
  1

• Unable to use Singularity runtime on Fred Hutch's rhino

  bug
  nextstrain/docker-base#258 · Filter by author victorlin opened on Jul 15, 2025
  7

  

• CI: Add new core pathogens to test-pathogen-repo-ci

  nextstrain/docker-base#238 · Filter by author joverlee521 opened on Jan 6, 2025

• Improve the process around pinning 3rd party tools

  nextstrain/docker-base#227 · Filter by author victorlin opened on Jul 26, 2024
  3

• Use Ubuntu packages for FastTree and other programs?

  proposal
  nextstrain/docker-base#127 · Filter by author victorlin opened on Dec 23, 2022
  6

• MAFFT: current version has a bug in the FFT-NS-i / --auto options

  bug
  nextstrain/docker-base#99 · Filter by author victorlin opened on Oct 18, 2022
  1

• Test whether re-installing GMP improves execution time of long-running workflows

  enhancement
  nextstrain/docker-base#97 · Filter by author victorlin opened on Oct 17, 2022
  3