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Queries for the WikiPathways SPARQL endpoint.

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SPARQL Queries for WikiPathways

Example SPARQL queries for the WikiPathways SPARQL editor. They help people explore the WikiPathways RDF and start their own queries.

Each example is a Turtle file with the query and its metadata (title, description, version, creators, category, parameters), in the format of SIB's sparql-examples. Every example has a permanent identifier and IRI, for example WPQ036 is https://sparql.wikipathways.org/.well-known/sparql-examples/WPQ036. Files can be moved and renamed without breaking links.

  • AUTHORING.md: how to write or change an example, and how versions work.
  • categories.ttl: the categories that make up the editor's tree.
  • contributors.ttl: names of creators and contributors.
  • collection.ttl: the collection itself.

On every push to master, CI publishes the examples-index branch, which the editor reads; it also holds every past version of every example and plain .rq copies.

The examples used to be .rq files; the last commit with them is fed6a2d, which also has the scripts that converted them. Old links to an .rq path still open the right example, and the rq/ folder of the examples-index branch has generated .rq copies for tools that read that format.

License

GPLv3

About

Queries for the WikiPathways SPARQL endpoint.

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3 stars

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3 watching

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