R package: Evolutionary biology in R
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Sep 4, 2026 - R
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comparative-methods
Here are 14 public repositories matching this topic...
R package to perform sensitivity analysis for comparative methods
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Jun 10, 2020 - R
Perform phylogenetic path analysis in R.
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Aug 27, 2026 - R
Open Software for Teaching Evolutionary Biology at Multiple Scales Through Virtual Inquiries
phylogenetics population-genetics paleobiology comparative-methods evolutionary-biology macroevolution science-education biodiversity-science simulation-based-learning inquiry-based-learning data-driven-education
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Apr 1, 2026 - R
R package for evolutionary mapping of continuous traits
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May 18, 2026 - R
R package: joint models of chromosome number and binary traits
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May 10, 2026 - R
Supplementary R code for analyses in "Rates of passerine body plan evolution in time and space"
morphology birds phylogenetics spatial-analysis comparative-methods biogeography evolutionary-biology macroevolution passerines
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Jul 28, 2026 - R
Interactive 3D phylogenetic tree visualizer for continuous trait evolution and supplied ancestral-state estimates; standalone WebGL2 HTML.
python webgl bioinformatics evolution data-visualization scientific-visualization phylogenetics webgl2 newick interactive-visualization phylogeny 3d-visualization comparative-methods evolutionary-biology phylogenetic-tree macroevolution trait-evolution phylogenetic-visualization continuous-traits ancestral-states
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Sep 30, 2026 - Python
Independently maintained fork of l1ou for detecting evolutionary shifts and convergent regimes in comparative data.
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Sep 27, 2026 - R
From-scratch molecular-phylogenetics algorithms in R — pairwise alignment, TN93 evolution simulation, UPGMA, Felsenstein likelihood, and independent contrasts, each with passing RUnit tests.
bioinformatics r ape computational-biology smith-waterman needleman-wunsch phylogenetics rstats dynamic-programming molecular-evolution maximum-likelihood upgma sequence-alignment comparative-methods felsenstein
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Jun 5, 2026 - R
Primitive functions for speeding up elements of a phylogenetic comparative workflow
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Jul 14, 2017 - R
Code and Figures for Souza Ferreira et al.
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Jun 5, 2024 - HTML
This directory contains code for the paper A phylogenomic framework for pelagiarian fishes (Acanthomorpha: Percomorpha) highlights mosaic radiation in the open ocean. If you want to run this code, I recommend downloading this code and the data directory from Data Dryad.
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Mar 30, 2021 - R
python machine-learning linear-regression supervised-learning algorithm-analysis support-vector-machines comparative-methods algorithsm-implemented k-nearest-neighbors-k-nn
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Sep 23, 2019 - Jupyter Notebook
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