kclinmicro

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1. emuse emuse Public

   Generation of html report from 16S results

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2. 16s-ont-course 16s-ont-course Public

   Project repo for the 16S ONT course given via ECDC in June 2026

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3. bartender bartender Public

   UI to generate samplesheets for ONT sequencing outputs

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4. emutools emutools Public

   A collection of tools for working with output from the Emu tool, to visualize and troubleshoot its outputs

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5. viralrecon viralrecon Public

   Forked from nf-core/viralrecon

   Assembly and intrahost/low-frequency variant calling for viral samples

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6. nf-schema-2.2.0 nf-schema-2.2.0 Public

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