Issues

• Workaround for ComplexHeatmap in Positron plots pane

  jokergoo/ComplexHeatmap#1265 · Filter by author jmw86069 opened on May 11, 2026
  2

• Error in hclust(get_dist(submat, distance), method = method) : size cannot be NA nor exceed 65536

  jokergoo/ComplexHeatmap#1262 · Filter by author isamiq4 opened on Mar 30, 2026

• Extract Distance matrix from output

  jokergoo/ComplexHeatmap#1259 · Filter by author fconstancias opened on Feb 2, 2026

• column split alters cell_fun or layer_fun order

  jokergoo/ComplexHeatmap#1258 · Filter by author Harpreet525 opened on Jan 2, 2026

• anno_block() labels don't match split class labels

  jokergoo/ComplexHeatmap#1256 · Filter by author frederikziebell opened on Nov 28, 2025

• Reordering parent dendrogram slices in k-means split heatmap

  jokergoo/ComplexHeatmap#1255 · Filter by author rbutleriii opened on Nov 16, 2025
  3

• How to align row names

  jokergoo/ComplexHeatmap#1254 · Filter by author keenhl opened on Sep 25, 2025

• Unexpected column ordering in oncoPrint

  jokergoo/ComplexHeatmap#1253 · Filter by author nfarnoud opened on Aug 29, 2025

• the rasterization of heatmap annotation was done?

  jokergoo/ComplexHeatmap#1252 · Filter by author champeil opened on Aug 4, 2025

• Suggestion: Include an example to extract gene combinations from UpSetR output

  jokergoo/ComplexHeatmap#1251 · Filter by author EveliaCoss opened on Jul 10, 2025

• Column splitting and grouped annotations

  jokergoo/ComplexHeatmap#1250 · Filter by author qutkat opened on Jun 27, 2025

• dark mode for accessibility

  jokergoo/ComplexHeatmap#1249 · Filter by author chuddy-ibk opened on Jun 6, 2025
  1

• Barplot options add_numbers messes with ylim

  jokergoo/ComplexHeatmap#1248 · Filter by author thegrebe opened on May 28, 2025

• Incorrect numbers on reverse barplots

  jokergoo/ComplexHeatmap#1247 · Filter by author thegrebe opened on May 28, 2025

• legend label positions

  jokergoo/ComplexHeatmap#1246 · Filter by author jokergoo opened on May 26, 2025

• row annotations misalign when row_km is used with anno_mark()

  jokergoo/ComplexHeatmap#1245 · Filter by author Eomesodermin opened on May 8, 2025
  5

• axis text is rendering oddly with gridtext, is it possible to add marquee support?

  jokergoo/ComplexHeatmap#1243 · Filter by author ashleyp1 opened on Apr 11, 2025
  3

• How to have same color between column and row annotation

  jokergoo/ComplexHeatmap#1242 · Filter by author Harpreet525 opened on Mar 26, 2025
  1

• Customizing line width and color in heatmap legends

  jokergoo/ComplexHeatmap#1239 · Filter by author greengeckoruns opened on Feb 28, 2025
  1

• decorate_annotation does not recognize slice 1

  jokergoo/ComplexHeatmap#1238 · Filter by author h20gg702 opened on Feb 26, 2025
  2

• I can't seem to be getting the row order right between list of heatmaps. The dotplot is the first heatmap which is not properly aligning with other heatmaps. What am I doing wrong?

  jokergoo/ComplexHeatmap#1237 · Filter by author smk5g5 opened on Feb 18, 2025

• Annotation Concatenation Keeps Separate Borders

  jokergoo/ComplexHeatmap#1235 · Filter by author DarioS opened on Jan 31, 2025

• Inquiry on Changing Font Size of Annotation Column/Row Titles

  jokergoo/ComplexHeatmap#1232 · Filter by author zhangsyhub opened on Jan 10, 2025
  1

• Performance Issue: make_comb_mat with mode = "intersect" is extremely slow compared to mode = "distinct"

  jokergoo/ComplexHeatmap#1231 · Filter by author Silja8 opened on Jan 9, 2025

• Unable to use_raster function while plotting heatmap for CopyKit

  jokergoo/ComplexHeatmap#1230 · Filter by author Urja25 opened on Jan 4, 2025
  1