MEME Setup

MEME Suite notes

cmonkey-python was tested with MEME 4.3.0. To install this MEME version, the following procedure was used:

  wget http://meme.nbcr.net/downloads/old_versions/meme_4.3.0.tar.gz
  ./configure --prefix=/opt/local --enable-dependency-tracking --enable-opt --disable-shared --disable-fast-install --enable-serial --enable-build-libxml2 --enable-build-libxslt --enable-static --with-gnu-ld
  make
  make test
  sudo make install

Place /opt/local/bin in your search path so cmonkey-python can find the MEME tools. You can of course, set the prefix to be anywhere else, as long as you make sure that the MEME tools can be found in the search path later.