[aft-alfonso]

Accepted agent delivery; branch-keyed search descriptor included.

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Summary by cubic

Reorders AFT's v3 retention so unreferenced bases are reclaimed before the accounting walk, and makes the root-history census bounded and resumable, so storage cleanup no longer stalls on long project histories. Also counts call-graph bases against views.callgraph_copies and reclaims unused databases before refusing a write for low free space.

• Base references get first turn under the reservation lock; an owed measurement no longer delays reclamation.
• Root-history scans resume across passes within a budget, restart if the directory changes, and preserve binding clocks across a completed census refresh; a partial census never authorizes deletion.
• Disk-floor admission attempts a bounded, per-family reclaim with a cooldown before refusing; refused first writes still create no store, and a reclaim that frees nothing is retried only after a 60-second cooldown.
• Shared bases count once against the copy limit with the main checkout's base exempt; identical tracked edits can reuse an existing membership base, and test fixtures isolate host Git attributes so copy-limit behavior stays deterministic.
• Adds regression tests covering retention, admission, and copy-limit cases.

^{Written for commit d0c79a9. Summary will update on new commits.}