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PyATAC

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Python-wrapped and based ATAC seq pipeline

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Name		Name	Last commit message	Last commit date
atac_pipeline.sh		atac_pipeline.sh
csv_rename.sh		csv_rename.sh
getFragmentBed.pl		getFragmentBed.pl
jamm_atac_pipeline.sh		jamm_atac_pipeline.sh
jamm_peak_call.sh		jamm_peak_call.sh
map_reads.py		map_reads.py
orolab_atac_pipeline.sh		orolab_atac_pipeline.sh
orolab_peak_call.sh		orolab_peak_call.sh
preShift.pl		preShift.pl
pre_peak_calling.sh		pre_peak_calling.sh
run_macs2.py		run_macs2.py
run_macs2.sh		run_macs2.sh
run_sicer-rb.py		run_sicer-rb.py
run_sicer.py		run_sicer.py
run_sicer_rb.py		run_sicer_rb.py
trim_adapters.py		trim_adapters.py

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Python-wrapped and based ATAC seq pipeline

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