Issues

• The CLI should return any internal error messages to user if the biobox container fails.

  bioboxes/command-line-interface#112 · Filter by author michaelbarton opened on May 4, 2017

• The command line interface should return an error when the given input files don't exist.

  bioboxes/command-line-interface#111 · Filter by author michaelbarton opened on May 4, 2017
  

• Error running demo

  bioboxes/command-line-interface#102 · Filter by author jorvis opened on Aug 1, 2016
  9

• Benchmark assembly task doesn't like it when the output directory doesn't exist

  bioboxes/command-line-interface#89 · Filter by author michaelbarton opened on Mar 4, 2016
  2

• Update bioboxes.org Recipe

  enhancement
  bioboxes/command-line-interface#83 · Filter by author pbelmann opened on Dec 17, 2015

• Verify unsupervised Binning Containers

  enhancement
  bioboxes/command-line-interface#57 · Filter by author pbelmann opened on Oct 27, 2015
  2

  

• Verify binning tools

  enhancement
  bioboxes/command-line-interface#51 · Filter by author pbelmann opened on Sep 8, 2015
  

• A log file should be optionally be created.

  bioboxes/command-line-interface#28 · Filter by author michaelbarton opened on Aug 14, 2015

• Implement general YAML to command line option functionality

  bioboxes/command-line-interface#8 · Filter by author fungs opened on Jul 17, 2015
  5