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OSIPI
TF2.4_IVIM-MRI_CodeCollection
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Chore/preproc pin versions
- #185
#185
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darksim33
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Chore/preproc pin versions
#185
darksim33
wants to merge 14 commits into
main
OSIPI/TF2.4_IVIM-MRI_CodeCollection:main
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OSIPI/TF2.4_IVIM-MRI_CodeCollection:chore/preproc-pin-versions
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Commits on Apr 28, 2026
Start pre-processing pipeline based on IVIM recommendations paper
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Commits on Apr 30, 2026
draft of pipeline extended with example functions and distortion correction. untested
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Commits on Jun 26, 2026
Add first version of IVIM_preproc_config to generate a config file with preprocessing parameters. Adjust preproc pipeline to accept config as input.
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Commits on Sep 15, 2026
update pipeline and config compatibility. first tests
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Commits on Sep 17, 2026
Simplify denoise code in IVIM_preproc_pipeline
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Commits on Oct 16, 2026
Merge branch 'preproc_recommendation_paper' into preproc-main
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Move recommendation paper preprocessing pipeline to oriinal/preprocessing and rename to TF_recommendation_paper
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Commits on Oct 20, 2026
Adjust load_data to allow user-specified b-value file input.
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Bug fix in motion_correction. Add print statements.
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chore: compile and lock Python dependencies with uv hashes
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Commits on Oct 28, 2026
chore: Pin dependency ranges and add preproc extra
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chore: Remove obsolete requirements.in file
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Commits on Nov 3, 2026
chore: moved pytest-cov to test dependencies (removed from CI)
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test: switch to pyproject.toml for requirements.txt; add dedicated
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