Breeding Insight
- 67 followers
- United States of America
- https://breedinginsight.org
- moirasheehan@ufl.edu
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Repositories
- HapSearch Public
- brapi-Java-ProdServer Public Forked from plantbreeding/brapi-Java-ProdServer
BrAPI Java Production Server
- BIGr Public
This R package contains the functions developed within Breeding Insight to analyze diploid and polyploid breeding and genetic data
- SoftwareHub Public
- HapApp_utils Public
Scripts and workflow for building microhaplotype database from targeted genotyping platforms.
- Qploidy2 Public Forked from Cristianetaniguti/Qploidy
Estimates ploidy, aneuploidy and large-scale CNV based on genetic markers
- bi-api Public
- fieldbook2deltabreed Public
- MADCATS Public
Command-line tool that turns targeted-sequencing FASTQs into MADC tables of microhaplotypes and their read counts, counting each panel’s designed alleles and discovering new ones.
- BIGapp Public
The BIG app is a user-friendly R Shiny app to analyze genomic data without needing to use command-line tools and works across different species ploidy.
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