Issues

• Give the user the option to continue parsing records if a previous record has mismatched sequence and quality lengths

  onecodex/needletail#118 · Filter by author nrminor opened on Aug 7, 2026
  6

• Optimizations for multi-threading

  onecodex/needletail#111 · Filter by author RagnarGrootKoerkamp opened on Dec 10, 2025

• Consider dropping Send requirement on generic Read param to FastxReader

  onecodex/needletail#95 · Filter by author jchorl opened on Jan 23, 2025
  1

• Profile-Guided Optimization (PGO) benchmark results

  onecodex/needletail#72 · Filter by author zamazan4ik opened on Feb 9, 2024
  2

• I am looking for a function that gives me an iterator over the read SequenceRecord's.

  onecodex/needletail#70 · Filter by author stela2502 opened on Oct 4, 2023
  2

• string compress

  onecodex/needletail#59 · Filter by author jianshu93 opened on Aug 29, 2022
  1

• bit_kmers function will panic at 'attempt to multiply with overflow', if k-mer length is longer than 32 bp.

  enhancement
  onecodex/needletail#58 · Filter by author yiolino opened on Mar 29, 2022
  7

• Add a new iterator to skip "bad" bases without canonicalization

  onecodex/needletail#40 · Filter by author apcamargo opened on Feb 8, 2020
  3

• Benchmark against C implementations

  onecodex/needletail#34 · Filter by author bovee opened on Sep 10, 2019
  1

• Support NA -> AA translation

  onecodex/needletail#33 · Filter by author bovee opened on Sep 10, 2019
  3

• Add streaming hash structures

  onecodex/needletail#30 · Filter by author bovee opened on Aug 27, 2019
  1

• Do proptest testing

  onecodex/needletail#27 · Filter by author bovee opened on Aug 22, 2019

• Better API

  onecodex/needletail#18 · Filter by author bovee opened on Aug 24, 2018
  2

• Support 2bit files

  onecodex/needletail#12 · Filter by author bovee opened on Aug 21, 2018
  2