From 4524f1f5d1949aa3414d4a63679492f365c4b884 Mon Sep 17 00:00:00 2001 From: Jover Lee Date: Thu, 15 Oct 2026 16:38:36 -0700 Subject: [PATCH] Add treeknit Part of --- Dockerfile | 3 +++ 1 file changed, 3 insertions(+) diff --git a/Dockerfile b/Dockerfile index 6abc2ea..b44f660 100644 --- a/Dockerfile +++ b/Dockerfile @@ -323,6 +323,9 @@ RUN /builder-scripts/download-repo https://github.com/nextstrain/fauna master . # Add Treetime RUN pip3 install phylo-treetime +# Add treeknit +RUN pip3 install treeknit + # Augur # Augur is an editable install so we can overlay the augur version in the image # with --volume=.../augur:/nextstrain/augur and still have it globally