From 73d9d1f119a80638866e09e0196b1ec3b8ef7f95 Mon Sep 17 00:00:00 2001 From: "dependabot[bot]" <49699333+dependabot[bot]@users.noreply.github.com> Date: Thu, 15 Oct 2026 13:06:27 +0000 Subject: [PATCH] chore(deps): bump the dependencies group with 4 updates Bumps the dependencies group with 4 updates: [actions/create-github-app-token](https://github.com/actions/create-github-app-token), [prefix-dev/setup-pixi](https://github.com/prefix-dev/setup-pixi), [actions/upload-artifact](https://github.com/actions/upload-artifact) and [actions/download-artifact](https://github.com/actions/download-artifact). Updates `actions/create-github-app-token` from 3.2.0 to 3.3.0 - [Release notes](https://github.com/actions/create-github-app-token/releases) - [Changelog](https://github.com/actions/create-github-app-token/blob/main/CHANGELOG.md) - [Commits](https://github.com/actions/create-github-app-token/compare/bcd2ba49218906704ab6c1aa796996da409d3eb1...64ab729a6294000f5aa4a4bc0b73d1f32bc45510) Updates `prefix-dev/setup-pixi` from 0.10.2 to 0.11.0 - [Release notes](https://github.com/prefix-dev/setup-pixi/releases) - [Commits](https://github.com/prefix-dev/setup-pixi/compare/d3f436a425481402e6a95a1d1fc10331c708cd9e...9dabb60412d3d2d967a8d682f7ce01317af40514) Updates `actions/upload-artifact` from 7.0.1 to 7.0.2 - [Release notes](https://github.com/actions/upload-artifact/releases) - [Commits](https://github.com/actions/upload-artifact/compare/043fb46d1a93c77aae656e7c1c64a875d1fc6a0a...cf430e030ddbb5b0abf93d22962f4752f3646cd9) Updates `actions/download-artifact` from 8.0.1 to 8.0.2 - [Release notes](https://github.com/actions/download-artifact/releases) - [Commits](https://github.com/actions/download-artifact/compare/3e5f45b2cfb9172054b4087a40e8e0b5a5461e7c...9000827ccba6bdab643e8b6fd33ac0654aef8333) --- updated-dependencies: - dependency-name: actions/create-github-app-token dependency-version: 3.3.0 dependency-type: direct:production update-type: version-update:semver-minor dependency-group: dependencies - dependency-name: prefix-dev/setup-pixi dependency-version: 0.11.0 dependency-type: direct:production update-type: version-update:semver-minor dependency-group: dependencies - dependency-name: actions/upload-artifact dependency-version: 7.0.2 dependency-type: direct:production update-type: version-update:semver-patch dependency-group: dependencies - dependency-name: actions/download-artifact dependency-version: 8.0.2 dependency-type: direct:production update-type: version-update:semver-patch dependency-group: dependencies ... Signed-off-by: dependabot[bot] --- .github/workflows/release-please.yml | 2 +- .github/workflows/test_docs.yml | 2 +- .github/workflows/test_essenv.yml | 2 +- .github/workflows/test_planemo.yml | 2 +- .github/workflows/test_pytest.yml | 4 ++-- .github/workflows/test_ruff.yml | 2 +- .github/workflows/wheels-preview.yml | 10 +++++----- .github/workflows/wheels.yml | 10 +++++----- 8 files changed, 17 insertions(+), 17 deletions(-) diff --git a/.github/workflows/release-please.yml b/.github/workflows/release-please.yml index 675cf6a2f8..85eb681a77 100644 --- a/.github/workflows/release-please.yml +++ b/.github/workflows/release-please.yml @@ -13,7 +13,7 @@ jobs: release-please: runs-on: ubuntu-latest steps: - - uses: actions/create-github-app-token@bcd2ba49218906704ab6c1aa796996da409d3eb1 # v3.2.0 + - uses: actions/create-github-app-token@64ab729a6294000f5aa4a4bc0b73d1f32bc45510 # v3.3.0 id: app-token with: app-id: ${{ vars.RELEASE_PLEASE_APP_ID }} diff --git a/.github/workflows/test_docs.yml b/.github/workflows/test_docs.yml index 42d0d9692c..3ac546b111 100644 --- a/.github/workflows/test_docs.yml +++ b/.github/workflows/test_docs.yml @@ -12,7 +12,7 @@ jobs: - uses: actions/checkout@3d3c42e5aac5ba805825da76410c181273ba90b1 # v7.0.1 with: persist-credentials: false - - uses: prefix-dev/setup-pixi@d3f436a425481402e6a95a1d1fc10331c708cd9e # v0.10.2 + - uses: prefix-dev/setup-pixi@9dabb60412d3d2d967a8d682f7ce01317af40514 # v0.11.0 with: environments: default - name: build docs diff --git a/.github/workflows/test_essenv.yml b/.github/workflows/test_essenv.yml index d250712f02..d7b76e8913 100644 --- a/.github/workflows/test_essenv.yml +++ b/.github/workflows/test_essenv.yml @@ -12,7 +12,7 @@ jobs: - uses: actions/checkout@3d3c42e5aac5ba805825da76410c181273ba90b1 # v7.0.1 with: persist-credentials: false - - uses: prefix-dev/setup-pixi@d3f436a425481402e6a95a1d1fc10331c708cd9e # v0.10.2 + - uses: prefix-dev/setup-pixi@9dabb60412d3d2d967a8d682f7ce01317af40514 # v0.11.0 with: environments: ess - name: ess.py --dry-run diff --git a/.github/workflows/test_planemo.yml b/.github/workflows/test_planemo.yml index 3ee21edf70..085dfcd4f8 100644 --- a/.github/workflows/test_planemo.yml +++ b/.github/workflows/test_planemo.yml @@ -66,7 +66,7 @@ jobs: galaxy/wrapper/${{ matrix.tool }}.xml - name: upload test report if: always() - uses: actions/upload-artifact@043fb46d1a93c77aae656e7c1c64a875d1fc6a0a # v7.0.1 + uses: actions/upload-artifact@cf430e030ddbb5b0abf93d22962f4752f3646cd9 # v7.0.2 with: name: "Tool test output ${{ matrix.tool }}" path: tool_test_output* diff --git a/.github/workflows/test_pytest.yml b/.github/workflows/test_pytest.yml index 117c61e38a..169948cecd 100644 --- a/.github/workflows/test_pytest.yml +++ b/.github/workflows/test_pytest.yml @@ -39,7 +39,7 @@ jobs: - uses: actions/checkout@3d3c42e5aac5ba805825da76410c181273ba90b1 # v7.0.1 with: persist-credentials: false - - uses: prefix-dev/setup-pixi@d3f436a425481402e6a95a1d1fc10331c708cd9e # v0.10.2 + - uses: prefix-dev/setup-pixi@9dabb60412d3d2d967a8d682f7ce01317af40514 # v0.11.0 with: environments: ${{ matrix.pixi-env }} - name: build deeptools @@ -60,7 +60,7 @@ jobs: - uses: actions/checkout@3d3c42e5aac5ba805825da76410c181273ba90b1 # v7.0.1 with: persist-credentials: false - - uses: prefix-dev/setup-pixi@d3f436a425481402e6a95a1d1fc10331c708cd9e # v0.10.2 + - uses: prefix-dev/setup-pixi@9dabb60412d3d2d967a8d682f7ce01317af40514 # v0.11.0 with: environments: ${{ matrix.pixi-env }} - name: build deeptools diff --git a/.github/workflows/test_ruff.yml b/.github/workflows/test_ruff.yml index f8479b12ea..1c55975250 100644 --- a/.github/workflows/test_ruff.yml +++ b/.github/workflows/test_ruff.yml @@ -12,7 +12,7 @@ jobs: - uses: actions/checkout@3d3c42e5aac5ba805825da76410c181273ba90b1 # v7.0.1 with: persist-credentials: false - - uses: prefix-dev/setup-pixi@d3f436a425481402e6a95a1d1fc10331c708cd9e # v0.10.2 + - uses: prefix-dev/setup-pixi@9dabb60412d3d2d967a8d682f7ce01317af40514 # v0.11.0 with: environments: default - name: ruff check diff --git a/.github/workflows/wheels-preview.yml b/.github/workflows/wheels-preview.yml index b797dabd12..a60ed3f14a 100644 --- a/.github/workflows/wheels-preview.yml +++ b/.github/workflows/wheels-preview.yml @@ -62,7 +62,7 @@ jobs: gcc-aarch64-linux-gnu g++-aarch64-linux-gnu libc6-dev-arm64-cross crossbuild-essential-arm64 fi - name: Upload wheels - uses: actions/upload-artifact@043fb46d1a93c77aae656e7c1c64a875d1fc6a0a # v7.0.1 + uses: actions/upload-artifact@cf430e030ddbb5b0abf93d22962f4752f3646cd9 # v7.0.2 with: name: wheels-linux-${{ matrix.platform.target }} path: dist @@ -110,7 +110,7 @@ jobs: apt-get install -y gcc-aarch64-linux-gnu g++-aarch64-linux-gnu fi - name: Upload wheels - uses: actions/upload-artifact@043fb46d1a93c77aae656e7c1c64a875d1fc6a0a # v7.0.1 + uses: actions/upload-artifact@cf430e030ddbb5b0abf93d22962f4752f3646cd9 # v7.0.2 with: name: wheels-musllinux-${{ matrix.platform.target }} path: dist @@ -151,7 +151,7 @@ jobs: target: ${{ matrix.platform.target }} args: --release --out dist --find-interpreter - name: Upload wheels - uses: actions/upload-artifact@043fb46d1a93c77aae656e7c1c64a875d1fc6a0a # v7.0.1 + uses: actions/upload-artifact@cf430e030ddbb5b0abf93d22962f4752f3646cd9 # v7.0.2 with: name: wheels-macos-${{ matrix.platform.target }} path: dist @@ -185,7 +185,7 @@ jobs: command: sdist args: --out dist - name: Upload sdist - uses: actions/upload-artifact@043fb46d1a93c77aae656e7c1c64a875d1fc6a0a # v7.0.1 + uses: actions/upload-artifact@cf430e030ddbb5b0abf93d22962f4752f3646cd9 # v7.0.2 with: name: wheels-sdist path: dist @@ -195,7 +195,7 @@ jobs: runs-on: ubuntu-latest needs: [linux, musllinux, macos, sdist] steps: - - uses: actions/download-artifact@3e5f45b2cfb9172054b4087a40e8e0b5a5461e7c # v8.0.1 + - uses: actions/download-artifact@9000827ccba6bdab643e8b6fd33ac0654aef8333 # v8.0.2 with: pattern: wheels-* path: dist diff --git a/.github/workflows/wheels.yml b/.github/workflows/wheels.yml index bf23d7e42a..703759163a 100644 --- a/.github/workflows/wheels.yml +++ b/.github/workflows/wheels.yml @@ -62,7 +62,7 @@ jobs: # fi # env | grep SSL # for debugging when rust crate fails to find headers - name: Upload wheels - uses: actions/upload-artifact@043fb46d1a93c77aae656e7c1c64a875d1fc6a0a # v7.0.1 + uses: actions/upload-artifact@cf430e030ddbb5b0abf93d22962f4752f3646cd9 # v7.0.2 with: name: wheels-linux-${{ matrix.platform.target }} path: dist @@ -97,7 +97,7 @@ jobs: apt-get install -y gcc-aarch64-linux-gnu g++-aarch64-linux-gnu fi - name: Upload wheels - uses: actions/upload-artifact@043fb46d1a93c77aae656e7c1c64a875d1fc6a0a # v7.0.1 + uses: actions/upload-artifact@cf430e030ddbb5b0abf93d22962f4752f3646cd9 # v7.0.2 with: name: wheels-musllinux-${{ matrix.platform.target }} path: dist @@ -124,7 +124,7 @@ jobs: target: ${{ matrix.platform.target }} args: --release --out dist --find-interpreter - name: Upload wheels - uses: actions/upload-artifact@043fb46d1a93c77aae656e7c1c64a875d1fc6a0a # v7.0.1 + uses: actions/upload-artifact@cf430e030ddbb5b0abf93d22962f4752f3646cd9 # v7.0.2 with: name: wheels-macos-${{ matrix.platform.target }} path: dist @@ -141,7 +141,7 @@ jobs: command: sdist args: --out dist - name: Upload sdist - uses: actions/upload-artifact@043fb46d1a93c77aae656e7c1c64a875d1fc6a0a # v7.0.1 + uses: actions/upload-artifact@cf430e030ddbb5b0abf93d22962f4752f3646cd9 # v7.0.2 with: name: wheels-sdist path: dist @@ -156,7 +156,7 @@ jobs: contents: write attestations: write steps: - - uses: actions/download-artifact@3e5f45b2cfb9172054b4087a40e8e0b5a5461e7c # v8.0.1 + - uses: actions/download-artifact@9000827ccba6bdab643e8b6fd33ac0654aef8333 # v8.0.2 with: pattern: wheels-* path: dist