diff --git a/_data/members.yml b/_data/members.yml index 730d9eb..387b63e 100644 --- a/_data/members.yml +++ b/_data/members.yml @@ -48,11 +48,21 @@ scholar: c3sq1afExmsC orcid: 0000-0003-0339-8870 github: santiestrada32 - description: 'Santiago graduated from Technical University of Munich (TUM) with a degree in - Biomedical Computing. His research focuses on the deployment of deep learning methods for - quantifying imaging biomarkers in large cohort studies (e.g. [Rhineland Study](https://www.rheinland-studie.de/en/research/research-areas/)). - When not at the lab, Santiago enjoys going to the movies and exploring the city.' - projects: 'Olfactory Bulb Segmentation, Localized Brain Age Prediction, Automated Tools for Retina Image Analysis' + description: 'Santiago graduated from the Technical University of Munich (TUM) with a degree in + Biomedical Computing and completed his PhD in Computer Science at the University of Bonn. He conducted + his doctoral research within the Rhineland Study (PI: Prof. Monique M. B. Breteler) in collaboration + with the Deep-MI Lab, developing open-source MRI segmentation tools for abdominal adipose tissue + ([FatSegNet](https://deep-mi.org/research/fatsegnet/)), the + [olfactory bulb](https://github.com/Deep-MI/olf-bulb-segmentation), and hypothalamic + substructures ([HypVINN](https://github.com/Deep-MI/FastSurfer/blob/dev/HypVINN/README.md)). + These tools have been used to process scans from around 10,000 [Rhineland Study](https://www.rheinland-studie.de/en/research/research-areas/) participants, + as well as scans from other large cohorts, including [UK Biobank](https://www.ukbiobank.ac.uk/) and the [Human Connectome Project](https://www.humanconnectome.org/). + + + As a postdoctoral researcher, he develops scalable deep learning pipelines for extracting brain and + retinal imaging biomarkers to study neurodegeneration and population health. Outside the lab, + Santiago enjoys going to the movies and exploring the city.' + projects: 'Cerebellum, Brainstem and Choroid Plexus Segmentation' - name: David Kügler image: /static/img/members/kuegler.jpg diff --git a/_data/publications.yml b/_data/publications.yml index d973ad1..b760a85 100644 --- a/_data/publications.yml +++ b/_data/publications.yml @@ -31,6 +31,17 @@ # url: 'http://coollab.uni.edu/' # +- id: 'harsy_2026' + authors: 'Ulrich Harsy C, ..., **Estrada S**, **Kügler D**, ..., **Reuter M**, ..., Maier-Hein KH' + title: 'nnFoundation: 3D Foundation Models for Radiology' + journal: '*arXiv preprint*' + type: 'preprint' + year: 2026 + month: 9 + image: '/static/pub/harsy_2026.jpg' + arxiv: 2609.26924 + bibtex: '/static/pub/harsy_2026.bib' + - id: 'rassmann_2026' authors: '**Rassmann S**, **Kügler D**, Brunheim S, Ehses P , **Reuter M**' title: 'Rethinking Real-World MRI Denoising: Learning from Physical Noise' diff --git a/static/pub/harsy_2026.bib b/static/pub/harsy_2026.bib new file mode 100644 index 0000000..b835661 --- /dev/null +++ b/static/pub/harsy_2026.bib @@ -0,0 +1,9 @@ +@misc{harsy2026nnfoundation, + title={nnFoundation: 3D Foundation Models for Radiology}, + author={Ulrich Harsy, Constantin and Wald, Tassilo and Gotkowski, Karol and Kirchhoff, Yannick and Knopp, Marcel and Rokuss, Maximilian and Stegmeier, Elisa and Schader, Philipp and Trofimova, Dasha and Stock, Raphael and Kahl, Kim-Celine and Schaumann, Stephen and Erkan, Selen and Zimmerer, David and Denner, Stefan and Langenberg, Moritz and Ziegler, Sebastian and Eckstein, Katharina and Fischer, Maximilian and Suprijadi, Jonathan and Kov{\'a}cs, B{\'a}lint and Hamm, Benjamin and Deshpande, Anand and Bounias, Dimitrios and Disch, Nico and Xiao, Shuhan and K{\"a}chele, Jessica and Sellner, Jan and Baidya, Rajesh and Traub, Jeremias and Kr{\"a}mer, Lars and Zenk, Maximilian and R{\"a}dsch, Tim and Dvoretskii, Stefan and Peretzke, Robin and Deissler, Jonathan and Ertl, Alexandra and Ghosh, Partha and Dreher, Kris and Dinkelacker, Stefan and Reinke, Annika and Christodoulou, Evangelia and Saeed, Numan and Savriama, Yoland and Estrada, Santiago and K{\"u}gler, David and Daza Barragan, Laura Alexandra and Gonzalez Osorio, Cristina Isabel and Peeken, Jan and Baumgartner, Michael and Teichmann, Marvin and Chabin, Guillaume and Kirchler, Matthias and Koch, Valentin and {for the ALFA study} and Hohenhaus, Markus and Koslov, Dimitri and Decker, Nina and Yaqub, Mohammad and Heuser, Arnd and Reuter, Martin and Schnabel, Julia A. and Heimann, Tobias and Ghesu, Florin and Brachmann, Paul and Heu{\ss}el, Claus P. and Radbruch, Alexander and Brugnara, Gianluca and Rastogi, Aditya and Foltyn-Dumitru, Martha and Schlemmer, Heinz-Peter and Reicht, Ignaz and Holzschuh, Julius C. and Bach, Michael and Stieltjes, Bram and Schlamp, Kai and Maier-Hein, Lena and Nolden, Marco and Floca, Ralf and J{\"a}ger, Paul F. and Vollmuth, Philipp and Isensee, Fabian and Maier-Hein, Klaus H.}, + year={2026}, + eprint={2609.26924}, + archivePrefix={arXiv}, + primaryClass={cs.CV}, + url={https://arxiv.org/abs/2609.26924}, +} diff --git a/static/pub/harsy_2026.jpg b/static/pub/harsy_2026.jpg new file mode 100644 index 0000000..f165975 Binary files /dev/null and b/static/pub/harsy_2026.jpg differ